Finally watched this. Rather enjoyed it.
Much better than people made it out to be. I am looking through reviews, and they either don't get it or list complaints that do not actually exist in the film. The DVD has two cuts, so I'm wondering if the complaints are based on the other cut.
I think the bad mood towards this film comes from too much fan service being given to people lately. No, it doesn't have aliens or explosions or too much weirdness. Instead it's a story that follows the faith/science theme of the series and does it with complex moral situations.