It might be different on here, but the parts I liked about
Reloaded have always been the stuff other people seem to always hate. The Merovingian and The Architect. And the related world building episodes in
The Animatrix.
The latter two movies had really shitty pacing at a level that makes Nolan's Batman films look well paced. They also do a really bad job of explaining why Agent Smith is such a problem and why the solution/agreement to stop him is accepted.
Then again I never gave a shit about Neo or Zion or any of them, the programs were more interesting.
To make a semi-funny point only because I'm thinking about it from that tweet shared in the outside link thread making a joke about it, the whole "redpill" movement thing doesn't really seem to take into account The Architect's entire explanation of how the "choice" is intentionally planted by the machines as a form of control and how they recreate it every time. Though I'm sure there's a five hundred page explanation somewhere I could read about it, or a two hour video to watch.